STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSDC2Cold shock domain containing C2. (153 aa)    
Predicted Functional Partners:
PJA2
RING-type domain-containing protein.
     
 0.615
SNX4
Sorting nexin 4.
   
  
 0.613
CIP2A
Cell proliferation regulating inhibitor of protein phosphatase 2A.
      
 0.611
SEC61A1
SEC61 translocon alpha 1 subunit.
   
  
 0.606
RASAL2
RAS protein activator like 2.
      
 0.586
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
  
 0.577
MPPED2
Metallophosphoesterase domain containing 2.
      
 0.558
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
      
 0.558
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
    
 0.527
POLR2F
RNA polymerase II subunit F.
   
 
 0.526
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.