STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F13A1Coagulation factor XIII A chain. (736 aa)    
Predicted Functional Partners:
ENSAPLP00000016847
Uncharacterized protein.
    
 0.867
LOXHD1
Lipoxygenase homology domains 1.
    
 
 0.696
SLC26A5
Solute carrier family 26 member 5.
      
 0.664
F2
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.639
USH2A
Usherin.
     
 0.628
FGA
Fibrinogen alpha chain.
   
 0.600
ENSAPLP00000029084
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.564
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
     
 0.555
ASPM
Abnormal spindle microtubule assembly.
      
 0.553
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.