STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SURF6Surfeit 6. (389 aa)    
Predicted Functional Partners:
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.925
ENSAPLP00000022103
Brix domain-containing protein.
   
 
 0.908
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.888
RRP1B
Ribosomal RNA processing 1B.
   
 
 0.877
U3J2D4_ANAPP
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.872
ENSAPLP00000029814
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.872
RRP15
Ribosomal RNA processing 15 homolog.
   
 
 0.867
RPF1
Ribosome production factor 1 homolog.
   
 
 0.865
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.860
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.859
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.