Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMTC1Transmembrane O-mannosyltransferase targeting cadherins 1. (931 aa)    
Predicted Functional Partners:
INTS1
Integrator complex subunit 1.
    
 0.865
INTS11
Integrator complex subunit 11.
   
 0.845
INTS13
Integrator complex subunit 13.
   
 0.840
INTS10
Integrator complex subunit 10.
   
 0.840
POMGNT1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
      
 0.827
INTS9
Integrator complex subunit 9.
   
 0.797
INTS12
Integrator complex subunit 12.
    
 0.736
INTS2
Integrator complex subunit 2.
   
 0.711
B4GALT5
Beta-1,4-galactosyltransferase 5.
      
 0.697
INTS4
Integrator complex subunit 4.
    
 0.694
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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