Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCF1Neutrophil cytosolic factor 1. (387 aa)    
Predicted Functional Partners:
NCF4
Uncharacterized protein.
   
 0.999
NCF2
Neutrophil cytosolic factor 2.
   
 0.981
NOXA1
NADPH oxidase activator 1.
   
 0.972
PIN1
Peptidyl-prolyl cis-trans isomerase.
     
  0.943
CYBB
Cytochrome b-245 beta chain.
   
 0.924
NOX4
NADPH oxidase 4.
   
 0.911
NOX3
NADPH oxidase 3.
   
 0.910
ENSAPLP00000020716
SH3 domain-containing protein.
 
      0.895
U3IFZ3_ANAPP
FAD-binding FR-type domain-containing protein.
   
 0.885
NOX5
NADPH oxidase 5.
   
 0.881
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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