Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC3Armadillo repeat containing 3. (595 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.936
C4orf47
Chromosome 4 open reading frame 47.
    
 
 0.917
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.912
IQCD
IQ motif containing D.
   
 
 0.819
C5orf49
Chromosome 5 open reading frame 49.
   
 
 0.809
U3HYG5_ANAPP
DUF4201 domain-containing protein.
   
 
 0.805
ENSAPLP00000016785
Thioredoxin domain-containing protein.
   
 
 0.804
ENSAPLP00000018304
NDK domain-containing protein.
   
 
 0.804
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.800
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.800
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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