STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IBM6_ANAPPUncharacterized protein. (274 aa)    
Predicted Functional Partners:
NEUROD1
Neurogenic differentiation factor.
   
 0.639
DLL1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.636
FANCL
FA complementation group L.
    
 
 0.626
ENSAPLP00000017617
Uncharacterized protein.
   
 
 0.621
FANCF
Uncharacterized protein.
    
 
 0.620
FANCC
Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.
    
   0.609
BTG2
BTG anti-proliferation factor 2.
      
 0.591
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.519
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.517
NEUROD4
Neurogenic differentiation factor.
   
 0.433
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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