Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TC2NTandem C2 domains, nuclear. (489 aa)    
Predicted Functional Partners:
TMEM200A
Transmembrane protein 200A.
      
 0.669
WDR48
WD repeat domain 48.
      
 0.668
FJX1
Four-jointed box kinase 1.
      
 0.569
OTUD3
OTU deubiquitinase 3.
      
 0.548
SH3PXD2A
SH3 and PX domains 2A.
      
 0.545
PIWIL1
Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.
      
 0.544
U3J037_ANAPP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.511
CTSE
Cathepsin E; Belongs to the peptidase A1 family.
      
 0.503
RASAL2
RAS protein activator like 2.
      
 0.496
SLC25A10
Solute carrier family 25 member 10; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.481
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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