STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA1PTPRF interacting protein alpha 1. (1207 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.797
RIMS2
C2 domain-containing protein.
    
 0.787
ENSAPLP00000029757
Uncharacterized protein.
    
 0.787
ERC2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.672
ERC1
ELKS/RAB6-interacting/CAST family member 1.
   
 
 0.672
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
    
 0.639
UNC13B
Unc-13 homolog B.
    
 0.620
UNC13C
Unc-13 homolog C.
    
 0.620
TSPOAP1
Uncharacterized protein.
     
 0.610
RIMBP2
RIMS binding protein 2.
     
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.