STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHCTF1AT-hook containing transcription factor 1. (2278 aa)    
Predicted Functional Partners:
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.989
NUP133
Nucleoporin 133.
   
 0.985
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.979
NUP160
Nucleoporin 160.
   
 0.979
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.976
NUP37
Nucleoporin 37.
    
 0.976
NUP43
Nucleoporin 43.
    
 0.976
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
   
 0.975
NUP98
Nucleoporin 98.
   
 0.975
NUP155
Nucleoporin 155.
   
 0.960
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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