Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASPNAsporin. (392 aa)    
Predicted Functional Partners:
ACAN
Aggrecan.
    
 0.741
OGN
Osteoglycin.
   
 
0.709
FMOD
Fibromodulin.
  
 
0.674
LUM
Lumican.
  
 
0.661
PRELP
Proline and arginine rich end leucine rich repeat protein.
  
 
0.651
B4GALT5
Beta-1,4-galactosyltransferase 5.
     
 0.640
VCAN
Versican.
    
 0.626
CSGALNACT2
Hexosyltransferase.
    
 0.609
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.603
EVX2
Even-skipped homeobox 2.
      
 0.602
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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