Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RHOFRas homolog family member F, filopodia associated. (393 aa)    
Predicted Functional Partners:
RASL11B
RAS like family 11 member B.
    
 0.789
ENSAPLP00000020757
Uncharacterized protein.
    
 0.760
ENSAPLP00000024521
EH domain-containing protein.
    
 0.760
ENSAPLP00000028453
annotation not available
    
 0.760
ENSAPLP00000028515
Uncharacterized protein.
    
 0.760
ITSN2
Uncharacterized protein.
    
 0.760
BAIAP2L1
BAI1 associated protein 2 like 1.
    
 0.723
ECT2
Epithelial cell transforming 2.
    
 0.707
ENSAPLP00000030606
IMD domain-containing protein.
    
  0.696
VAMP3
Vesicle associated membrane protein 3.
   
 0.691
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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