STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHORhodopsin. (351 aa)    
Predicted Functional Partners:
GRK7
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
 0.985
GNAT2
G protein subunit alpha transducin 2.
   
 0.976
U3IZH6_ANAPP
Arrestin_C domain-containing protein.
   
 0.970
U3ICB9_ANAPP
Rhodopsin.
  
 
 
0.910
RPE65
Retinoid isomerohydrolase RPE65.
   
 
 0.778
GNAT1
G protein subunit alpha transducin 1.
   
 0.775
GNAT3
G protein subunit alpha transducin 3.
   
 0.775
GRK4
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
 0.768
GNB3
G protein subunit beta 3.
    
 0.753
PDE6B
Phosphodiesterase.
   
  
 0.741
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.