Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
TM9SF4Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (665 aa)    
Predicted Functional Partners:
EEF1AKNMT
EEF1A lysine and N-terminal methyltransferase.
      
 0.750
U3J9G5_ANAPP
Uncharacterized protein.
   
  
 0.718
PLAGL2
PLAG1 like zinc finger 2.
   
 
 0.659
EPHA1
EPH receptor A1.
   
  
 0.615
F3
Coagulation factor III, tissue factor.
    
   0.612
TMED1
GOLD domain-containing protein.
      
 0.590
TMED5
Transmembrane p24 trafficking protein 5.
      
 0.590
IER5L
Immediate early response 5 like.
      
 0.581
TMED2
Transmembrane p24 trafficking protein 2.
   
 
 0.557
RBBP8NL
RBBP8 N-terminal like.
      
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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