STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC102ACoiled-coil domain containing 102A. (524 aa)    
Predicted Functional Partners:
DOK6
Docking protein 6.
 
    
 0.631
KTN1
Kinectin 1.
      
 0.497
CDC42EP4
CRIB domain-containing protein.
      
 0.487
ASB2
Ankyrin repeat and SOCS box containing 2.
    
 
 0.473
RTTN
RTTN_N domain-containing protein.
      
 0.459
ENSAPLP00000024733
Uncharacterized protein.
      
 0.459
MAN2B2
Alpha-mannosidase.
      
 0.448
SUGCT
Succinyl-CoA:glutarate-CoA transferase.
      
 0.443
LAYN
Layilin.
      
 0.435
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.429
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.