STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)    
Predicted Functional Partners:
PCM1
Pericentriolar material 1.
    
 0.913
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.858
DLL1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.786
DLL4
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.786
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.785
USP9X
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
 0.756
CCDC14
Coiled-coil domain containing 14.
    
  0.748
CCP110
Centriolar coiled-coil protein 110.
    
  0.714
NHS
NHS actin remodeling regulator.
   
 0.701
JAG2
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.687
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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