STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF7C1q and TNF related 7. (289 aa)    
Predicted Functional Partners:
U3ICX4_ANAPP
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.626
AP3M1
AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.
      
 0.621
U3IK98_ANAPP
Uncharacterized protein.
    
 
 0.612
ANKIB1
ANK_REP_REGION domain-containing protein.
    
 
 0.612
KIAA1217
KIAA1217.
      
 0.611
MEX3A
Mex-3 RNA binding family member A.
      
 0.611
VPS26A
VPS26, retromer complex component A.
      
 0.611
SLC16A10
Solute carrier family 16 member 10.
      
 0.609
SLC35B2
Solute carrier family 35 member B2.
     
 0.609
BTBD1
BTB domain containing 1.
      
 0.593
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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