STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF7C1q and TNF related 7. (289 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
      
 0.712
ALG6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.712
COG3
Component of oligomeric golgi complex 3.
      
 0.617
LRRN2
Leucine rich repeat neuronal 2.
    
 0.611
ENSAPLP00000018682
Uncharacterized protein.
  
  0.572
LIMA1
LIM domain and actin binding 1.
      
 0.564
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 
 0.546
ENSAPLP00000030645
Uncharacterized protein.
  
     0.536
ENSAPLP00000029935
Uncharacterized protein.
  
     0.532
U3ICX4_ANAPP
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.516
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.