STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD1BSET domain containing 1B, histone lysine methyltransferase. (2013 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.993
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.993
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.985
DIDO1
PHD-type domain-containing protein.
   
 
 0.974
WDR82
WD repeat domain 82.
   
 0.961
ENSAPLP00000028245
Uncharacterized protein.
    
 0.955
WDR5B
WD repeat domain 5B.
   
 0.861
HCFC2
Host cell factor C2.
   
 0.857
ENSAPLP00000023897
Uncharacterized protein.
   
 0.851
U3I833_ANAPP
Histone H3; Belongs to the histone H3 family.
   
 0.849
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.