STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF2L1Stromal cell derived factor 2 like 1. (189 aa)    
Predicted Functional Partners:
DNAJB11
J domain-containing protein.
   
 0.886
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
   
 0.727
U3J188_ANAPP
Uncharacterized protein.
   
 
 0.705
DNAJC10
Uncharacterized protein.
   
 
 0.705
SNX1
Sorting nexin 1.
    
 
 0.704
CRELD2
Cysteine rich with EGF like domains 2.
   
 
 0.694
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.690
SPAG1
Sperm associated antigen 1.
     
 0.659
HYOU1
Hypoxia up-regulated 1.
   
 0.599
RRAGB
Ras related GTP binding B.
      
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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