STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAK1IP1PAK1 interacting protein 1. (374 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.931
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.912
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.856
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.851
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 
 0.831
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.828
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.821
HTATSF1
HIV-1 Tat specific factor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.818
WDR12
WD repeat domain 12.
  
 
 0.802
ENSAPLP00000030905
Brix domain-containing protein.
   
 
 0.795
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.