STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDXDC1Pyridoxal dependent decarboxylase domain containing 1. (765 aa)    
Predicted Functional Partners:
NTAN1
N-terminal asparagine amidase.
      
 0.686
BAHD1
Bromo adjacent homology domain containing 1.
      
 0.675
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.670
BFAR
Bifunctional apoptosis regulator.
      
 0.670
CXorf56
Chromosome X open reading frame 56.
      
 0.661
KIAA2013
KIAA2013.
      
 0.650
THRAP3
Thyroid hormone receptor associated protein 3.
      
 0.596
MPV17L
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.589
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
      
 0.586
CCDC6
Coiled-coil domain containing 6.
      
 0.581
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.