STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM14Tripartite motif containing 14. (424 aa)    
Predicted Functional Partners:
MAVS
CARD_2 domain-containing protein.
    
 0.800
U3J0F4_ANAPP
Uncharacterized protein.
   
 
 0.727
USP14
Ubiquitin carboxyl-terminal hydrolase.
    
 0.686
TRAT1
T cell receptor associated transmembrane adaptor 1.
   
  
 0.686
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.615
TRIM29
Tripartite motif containing 29.
   
 0.606
PPP6C
Serine/threonine-protein phosphatase.
    
 
 0.600
ENSAPLP00000016618
WD_REPEATS_REGION domain-containing protein.
   
  0.530
WDR90
Uncharacterized protein.
   
  0.530
U3J1K3_ANAPP
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.525
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.