STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC45A3Solute carrier family 45 member 3. (577 aa)    
Predicted Functional Partners:
ELK4
ETS transcription factor ELK4.
 
    
 0.751
PHAX
Phosphorylated adaptor for RNA export.
    
   0.687
ETV1
ETS variant 1.
      
 0.598
PM20D1
Peptidase M20 domain containing 1.
      
 0.570
SLC6A20
Solute carrier family 6 member 20.
      
 0.556
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
      
 0.553
RAB29
RAB29, member RAS oncogene family.
      
 0.545
KCNJ5
Potassium voltage-gated channel subfamily J member 5.
      
 0.545
STEAP2
STEAP2 metalloreductase.
      
 0.544
ENSAPLP00000030344
Uncharacterized protein.
      
 0.544
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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