STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF1Dynein assembly factor 1, axonemal. (710 aa)    
Predicted Functional Partners:
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.869
CCDC39
Coiled-coil domain containing 39.
    
 0.778
DNAI1
Dynein axonemal intermediate chain 1.
   
 0.772
RSPH9
Radial spoke head 9 homolog.
   
 0.746
ZMYND10
Zinc finger MYND-type containing 10.
   
 
 0.741
CCDC65
Coiled-coil domain containing 65.
   
 
 0.737
LRRC6
Leucine rich repeat containing 6.
    
 0.719
U3I2X0_ANAPP
Uncharacterized protein.
   
 
 0.710
RSPH4A
Radial spoke head 6 homolog A.
    
 
 0.689
DNAAF4
Dynein axonemal assembly factor 4.
    
 
 0.661
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.