STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (308 aa)    
Predicted Functional Partners:
BET1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.963
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.925
ENSAPLP00000028388
Uncharacterized protein.
    
 0.923
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.880
NAPB
NSF attachment protein beta.
   
 0.868
STX18
Syntaxin 18.
   
 0.853
RINT1
RAD50 interactor 1.
    
 0.840
SEC24B
SEC24 homolog B, COPII coat complex component.
    
 0.823
SEC23A
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.823
SEC24A
Uncharacterized protein.
    
 0.823
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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