Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (308 aa)    
Predicted Functional Partners:
BET1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.938
ENSAPLP00000028388
Uncharacterized protein.
   
 0.924
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.877
NAPB
NSF attachment protein beta.
   
 0.865
STX18
Syntaxin 18.
   
 0.847
SEC24B
SEC24 homolog B, COPII coat complex component.
    
 0.829
SEC24A
Uncharacterized protein.
    
 0.829
NBAS
Neuroblastoma amplified sequence.
    
 0.828
ENSAPLP00000031300
Uncharacterized protein.
     
 0.823
ZW10
Zw10 kinetochore protein.
    
 0.809
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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