STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H1Ring finger and CCCH-type domains 1. (1122 aa)    
Predicted Functional Partners:
TRAPPC10
Foie-gras_1 domain-containing protein.
    
 
 0.891
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.681
RC3H2
Ring finger and CCCH-type domains 2.
  
 
  
0.578
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.577
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.563
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 
 0.551
MYSM1
Myb like, SWIRM and MPN domains 1.
   
   0.531
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 
 0.521
ENSAPLP00000020285
IGv domain-containing protein.
      
 0.489
PIK3R6
Phosphoinositide-3-kinase regulatory subunit 6.
      
 0.487
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.