STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPBP1L1GC-rich promoter binding protein 1 like 1. (471 aa)    
Predicted Functional Partners:
TMEM69
Transmembrane protein 69.
      
 0.769
RANBP10
RAN binding protein 10.
   
  
 0.753
ZFYVE27
Zinc finger FYVE-type containing 27.
      
 0.548
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.513
RANBP9
RAN binding protein 9.
   
  
 0.477
FNDC11
Fibronectin type III domain containing 11.
    
   0.474
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
      
 0.418
PKIA
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
  
     0.416
DLEU7
Deleted in lymphocytic leukemia 7.
      
 0.406
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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