U3ICJ1_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

U3ICJ1_ANAPP

Uncharacterized protein. (2007 aa)

Predicted Functional Partners:

SLC17A8

0.609

ENSAPLP00000020167

0.547

ADGRV1

0.545

WFS1

0.545

WNT8A

0.544

RNF213

0.544

GLRX5

0.529

SYNPR

0.494

NFS1

0.478

SLC17A6

0.458

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRV1	ENSAPLP00000020167	ENSAPLP00000007911	ENSAPLP00000020167	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.604
ADGRV1	SLC17A6	ENSAPLP00000007911	ENSAPLP00000009269	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Solute carrier family 17 member 6.	0.564
ADGRV1	SLC17A8	ENSAPLP00000007911	ENSAPLP00000012728	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Solute carrier family 17 member 8.	0.846
ADGRV1	U3ICJ1_ANAPP	ENSAPLP00000007911	ENSAPLP00000004963	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.545
ADGRV1	WFS1	ENSAPLP00000007911	ENSAPLP00000012644	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Wolframin ER transmembrane glycoprotein.	0.769
ENSAPLP00000020167	ADGRV1	ENSAPLP00000020167	ENSAPLP00000007911	Uncharacterized protein.	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	0.604
ENSAPLP00000020167	SLC17A6	ENSAPLP00000020167	ENSAPLP00000009269	Uncharacterized protein.	Solute carrier family 17 member 6.	0.464
ENSAPLP00000020167	SLC17A8	ENSAPLP00000020167	ENSAPLP00000012728	Uncharacterized protein.	Solute carrier family 17 member 8.	0.849
ENSAPLP00000020167	U3ICJ1_ANAPP	ENSAPLP00000020167	ENSAPLP00000004963	Uncharacterized protein.	Uncharacterized protein.	0.547
ENSAPLP00000020167	WFS1	ENSAPLP00000020167	ENSAPLP00000012644	Uncharacterized protein.	Wolframin ER transmembrane glycoprotein.	0.881
GLRX5	NFS1	ENSAPLP00000030894	ENSAPLP00000003479	Glutaredoxin 5.	Aminotran_5 domain-containing protein.	0.910
GLRX5	U3ICJ1_ANAPP	ENSAPLP00000030894	ENSAPLP00000004963	Glutaredoxin 5.	Uncharacterized protein.	0.529
NFS1	GLRX5	ENSAPLP00000003479	ENSAPLP00000030894	Aminotran_5 domain-containing protein.	Glutaredoxin 5.	0.910
NFS1	U3ICJ1_ANAPP	ENSAPLP00000003479	ENSAPLP00000004963	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.478
RNF213	U3ICJ1_ANAPP	ENSAPLP00000016880	ENSAPLP00000004963	Ring finger protein 213.	Uncharacterized protein.	0.544
SLC17A6	ADGRV1	ENSAPLP00000009269	ENSAPLP00000007911	Solute carrier family 17 member 6.	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	0.564
SLC17A6	ENSAPLP00000020167	ENSAPLP00000009269	ENSAPLP00000020167	Solute carrier family 17 member 6.	Uncharacterized protein.	0.464
SLC17A6	SLC17A8	ENSAPLP00000009269	ENSAPLP00000012728	Solute carrier family 17 member 6.	Solute carrier family 17 member 8.	0.943
SLC17A6	SYNPR	ENSAPLP00000009269	ENSAPLP00000030279	Solute carrier family 17 member 6.	Synaptoporin.	0.647
SLC17A6	U3ICJ1_ANAPP	ENSAPLP00000009269	ENSAPLP00000004963	Solute carrier family 17 member 6.	Uncharacterized protein.	0.458