AP3S2 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AP3S2

Adaptor related protein complex 3 subunit sigma 2. (193 aa)

Predicted Functional Partners:

AP3D1

0.994

AP3M1

0.987

AP3B2

0.981

GAK

0.975

AP3M2

0.968

AP1G1

0.908

AP1M1

0.907

RPL7A

0.903

AP3B1

0.884

AP4E1

0.858

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1G1	AP1M1	ENSAPLP00000029438	ENSAPLP00000008799	AP-1 complex subunit gamma.	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	0.998
AP1G1	AP3B1	ENSAPLP00000029438	ENSAPLP00000013575	AP-1 complex subunit gamma.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.906
AP1G1	AP3B2	ENSAPLP00000029438	ENSAPLP00000028265	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit beta 2.	0.860
AP1G1	AP3D1	ENSAPLP00000029438	ENSAPLP00000017574	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit delta 1.	0.501
AP1G1	AP3M1	ENSAPLP00000029438	ENSAPLP00000010245	AP-1 complex subunit gamma.	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.	0.781
AP1G1	AP3M2	ENSAPLP00000029438	ENSAPLP00000031101	AP-1 complex subunit gamma.	AP-3 complex subunit mu-2.	0.781
AP1G1	AP3S2	ENSAPLP00000029438	ENSAPLP00000005012	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit sigma 2.	0.908
AP1G1	AP4E1	ENSAPLP00000029438	ENSAPLP00000022379	AP-1 complex subunit gamma.	Adaptor related protein complex 4 subunit epsilon 1.	0.685
AP1G1	GAK	ENSAPLP00000029438	ENSAPLP00000009204	AP-1 complex subunit gamma.	Cyclin G associated kinase.	0.970
AP1M1	AP1G1	ENSAPLP00000008799	ENSAPLP00000029438	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	AP-1 complex subunit gamma.	0.998
AP1M1	AP3B1	ENSAPLP00000008799	ENSAPLP00000013575	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.696
AP1M1	AP3B2	ENSAPLP00000008799	ENSAPLP00000028265	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	Adaptor related protein complex 3 subunit beta 2.	0.545
AP1M1	AP3D1	ENSAPLP00000008799	ENSAPLP00000017574	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	Adaptor related protein complex 3 subunit delta 1.	0.770
AP1M1	AP3M1	ENSAPLP00000008799	ENSAPLP00000010245	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.	0.414
AP1M1	AP3M2	ENSAPLP00000008799	ENSAPLP00000031101	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	AP-3 complex subunit mu-2.	0.414
AP1M1	AP3S2	ENSAPLP00000008799	ENSAPLP00000005012	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	Adaptor related protein complex 3 subunit sigma 2.	0.907
AP1M1	AP4E1	ENSAPLP00000008799	ENSAPLP00000022379	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	Adaptor related protein complex 4 subunit epsilon 1.	0.895
AP1M1	GAK	ENSAPLP00000008799	ENSAPLP00000009204	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	Cyclin G associated kinase.	0.969
AP3B1	AP1G1	ENSAPLP00000013575	ENSAPLP00000029438	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit gamma.	0.906
AP3B1	AP1M1	ENSAPLP00000013575	ENSAPLP00000008799	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	0.696