Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRSAM1Leucine rich repeat and sterile alpha motif containing 1. (733 aa)    
Predicted Functional Partners:
CAB39L
Calcium binding protein 39 like.
    
 
 0.657
CAB39
Calcium binding protein 39.
    
 
 0.657
STK24
Serine/threonine kinase 24.
   
 
 0.615
STK25
Protein kinase domain-containing protein.
   
 
 0.615
STK26
Serine/threonine kinase 26.
   
 
 0.612
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
    
 0.595
NARS1
Asparaginyl-tRNA synthetase.
      
 0.573
SMURF1
E3 ubiquitin-protein ligase.
    
 0.557
ENSAPLP00000027521
Uncharacterized protein.
    
  0.528
IGHMBP2
Immunoglobulin mu DNA binding protein 2.
   
  
 0.524
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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