HMGXB3 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

HMGXB3

CxC4 domain-containing protein. (879 aa)

Predicted Functional Partners:

ENSAPLP00000026220

0.900

SLC26A2

0.546

NRSN2

0.525

NADK2

0.457

SASS6

0.442

U3I1J3_ANAPP

0.422

SLC26A1

0.404

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPLP00000026220	HMGXB3	ENSAPLP00000026220	ENSAPLP00000005087	HMG box domain-containing protein.	CxC4 domain-containing protein.	0.900
ENSAPLP00000026220	NADK2	ENSAPLP00000026220	ENSAPLP00000007534	HMG box domain-containing protein.	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	0.457
ENSAPLP00000026220	NRSN2	ENSAPLP00000026220	ENSAPLP00000024650	HMG box domain-containing protein.	Neurensin 2.	0.525
ENSAPLP00000026220	SASS6	ENSAPLP00000026220	ENSAPLP00000014627	HMG box domain-containing protein.	SAS-6 centriolar assembly protein.	0.442
ENSAPLP00000026220	SLC26A1	ENSAPLP00000026220	ENSAPLP00000020240	HMG box domain-containing protein.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.404
ENSAPLP00000026220	SLC26A2	ENSAPLP00000026220	ENSAPLP00000009591	HMG box domain-containing protein.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.546
ENSAPLP00000026220	U3I1J3_ANAPP	ENSAPLP00000026220	ENSAPLP00000001113	HMG box domain-containing protein.	Uncharacterized protein.	0.422
HMGXB3	ENSAPLP00000026220	ENSAPLP00000005087	ENSAPLP00000026220	CxC4 domain-containing protein.	HMG box domain-containing protein.	0.900
HMGXB3	NADK2	ENSAPLP00000005087	ENSAPLP00000007534	CxC4 domain-containing protein.	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	0.457
HMGXB3	NRSN2	ENSAPLP00000005087	ENSAPLP00000024650	CxC4 domain-containing protein.	Neurensin 2.	0.525
HMGXB3	SASS6	ENSAPLP00000005087	ENSAPLP00000014627	CxC4 domain-containing protein.	SAS-6 centriolar assembly protein.	0.442
HMGXB3	SLC26A1	ENSAPLP00000005087	ENSAPLP00000020240	CxC4 domain-containing protein.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.404
HMGXB3	SLC26A2	ENSAPLP00000005087	ENSAPLP00000009591	CxC4 domain-containing protein.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.546
HMGXB3	U3I1J3_ANAPP	ENSAPLP00000005087	ENSAPLP00000001113	CxC4 domain-containing protein.	Uncharacterized protein.	0.422
NADK2	ENSAPLP00000026220	ENSAPLP00000007534	ENSAPLP00000026220	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	HMG box domain-containing protein.	0.457
NADK2	HMGXB3	ENSAPLP00000007534	ENSAPLP00000005087	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	CxC4 domain-containing protein.	0.457
NRSN2	ENSAPLP00000026220	ENSAPLP00000024650	ENSAPLP00000026220	Neurensin 2.	HMG box domain-containing protein.	0.525
NRSN2	HMGXB3	ENSAPLP00000024650	ENSAPLP00000005087	Neurensin 2.	CxC4 domain-containing protein.	0.525
NRSN2	SLC26A2	ENSAPLP00000024650	ENSAPLP00000009591	Neurensin 2.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.478
SASS6	ENSAPLP00000026220	ENSAPLP00000014627	ENSAPLP00000026220	SAS-6 centriolar assembly protein.	HMG box domain-containing protein.	0.442