STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3ICX4_ANAPPUncharacterized protein; Belongs to the DEAD box helicase family. (662 aa)    
Predicted Functional Partners:
U3IPR8_ANAPP
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
 
 0.761
RBM25
RNA binding motif protein 25.
   
 0.748
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.716
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.701
GNL3
G protein nucleolar 3.
  
 0.682
EBNA1BP2
EBNA1 binding protein 2.
   
 0.671
WDR12
WD repeat domain 12.
   
 0.645
MTREX
Mtr4 exosome RNA helicase.
   
 0.632
VPS26A
VPS26, retromer complex component A.
   
  
 0.628
C1QTNF7
C1q and TNF related 7.
    
 0.626
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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