STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOL8Nucleolar protein 8. (1188 aa)    
Predicted Functional Partners:
DDX10
RNA helicase.
   
 
 0.777
DDX47
DEAD-box helicase 47; Belongs to the DEAD box helicase family.
   
 
 0.643
EPN3
Epsin 3.
      
 0.635
ARHGEF28
Rho guanine nucleotide exchange factor 28.
      
 0.611
SDAD1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
  
 0.588
E4F1
E4F transcription factor 1.
    
 
 0.565
NIP7
Nucleolar pre-rRNA processing protein NIP7.
    
 
 0.550
ZNHIT6
Zinc finger HIT-type containing 6.
   
  
 0.531
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
   
  
 0.530
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
      
 0.521
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.