STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2G-patch domain containing 2. (506 aa)    
Predicted Functional Partners:
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.871
DHX15
DEAH-box helicase 15.
    
 0.827
PINX1
PIN2 (TERF1) interacting telomerase inhibitor 1.
    
 
 0.739
DDX10
RNA helicase.
   
 0.729
DDX18
RNA helicase.
    
  0.701
BYSL
Bystin like.
    
 
 0.687
NOL6
Nucleolar protein 6.
   
 
 0.684
UTP25
UTP25 small subunit processor component.
    
 
 0.673
CCNL1
Cyclin L1; Belongs to the cyclin family.
   
   0.672
UTP3
UTP3 small subunit processome component.
   
   0.670
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.