STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SURF2Surfeit 2. (264 aa)    
Predicted Functional Partners:
SURF6
Surfeit 6.
      
 0.818
SURF4
Surfeit 4.
      
 0.805
TMEM258
Transmembrane protein 258.
      
 0.622
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  
 0.619
PREPL
Prolyl endopeptidase like.
      
 0.612
PACRG
Parkin coregulated.
      
 0.611
SURF1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.586
STKLD1
Serine/threonine kinase like domain containing 1.
 
      0.446
YY1
YY1 transcription factor.
      
 0.430
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.