Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FGGYFGGY carbohydrate kinase domain containing. (469 aa)    
Predicted Functional Partners:
RPE
Uncharacterized protein.
     
 0.907
RPIA
Ribose 5-phosphate isomerase A.
  
 
 0.824
PGD
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 
 0.817
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.787
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.597
IFT80
Intraflagellar transport 80.
     
 0.580
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.567
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.564
REM1
Uncharacterized protein.
    
 
 0.548
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.541
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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