STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM1Uncharacterized protein. (1418 aa)    
Predicted Functional Partners:
ENSAPLP00000029835
LSDAT_euk domain-containing protein.
 
      0.900
ELFN1
Extracellular leucine rich repeat and fibronectin type III domain containing 1.
     
 0.544
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
      
 0.544
MLANA
Melan-A.
   
  
 0.541
CLCN7
Chloride channel protein.
      
 0.509
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
     
 0.508
EDNRB
Endothelin receptor type B; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.502
LYST
Uncharacterized protein.
   
  
 0.493
MITF
Melanocyte inducing transcription factor.
   
 0.491
TYR
Tyrosinase.
     
 0.482
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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