STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2H1General transcription factor IIH subunit 1. (557 aa)    
Predicted Functional Partners:
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.999
GTF2H3
General transcription factor IIH subunit 3.
    
 0.999
GTF2H5
General transcription factor IIH subunit 5.
    
 0.999
GTF2H2
General transcription factor IIH subunit.
    
 0.996
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.994
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
    
 0.992
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.991
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.989
GTF2E1
General transcription factor IIE subunit 1.
   
 0.976
ENSAPLP00000019176
annotation not available
    
 0.951
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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