Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPCS3Signal peptidase complex subunit 3. (176 aa)    
Predicted Functional Partners:
SPCS1
Signal peptidase complex subunit 1.
   
 0.998
SPCS2
Signal peptidase complex subunit 2.
   
 0.998
SEC11A
Signal peptidase complex catalytic subunit SEC11.
   
 0.955
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
   
 0.955
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.919
GRP
Uncharacterized protein.
   
 0.907
IMMP1L
Mitochondrial inner membrane protease subunit.
   
 0.787
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
   
 0.787
IMMP2L-2
Uncharacterized protein.
   
 0.787
SEC61B
SEC61 translocon beta subunit.
   
 
 0.696
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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