STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM6SF1Transmembrane 6 superfamily member 1. (188 aa)    
Predicted Functional Partners:
TMEM182
Transmembrane protein 182.
      
 0.848
MXRA8
Matrix remodeling associated 8.
      
 0.846
TIMM22
Translocase of inner mitochondrial membrane 22.
      
 0.558
ACSBG1
Acyl-CoA synthetase bubblegum family member 1.
      
 0.553
ACSBG2
Acyl-CoA synthetase bubblegum family member 2.
      
 0.553
MORF4L1
Mortality factor 4 like 1.
      
 0.457
PLXDC2
Plexin domain containing 2.
      
 0.436
G3BP1
G3BP stress granule assembly factor 1.
      
 0.418
ITPRID2
ITPR interacting domain containing 2.
      
 0.404
U3IM44_ANAPP
Uncharacterized protein.
      
 0.401
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.