STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYOD1Myogenic factor. (297 aa)    
Predicted Functional Partners:
EP300
E1A binding protein p300.
    
 
 0.962
FBXO32
F-box protein 32.
    
 
 0.932
PAX7
Paired box 7.
   
 
 0.924
CREBBP
CREB binding protein.
    
 
 0.914
TCF3
Transcription factor 3.
    
 0.850
MEF2C
Myocyte enhancer factor 2C.
    
 0.844
PAX3
Paired box 3.
   
 
 0.818
MEF2A
Myocyte enhancer factor 2A.
    
 0.806
MSTN
Myostatin.
   
  
 0.804
TCF12
BHLH domain-containing protein.
    
 0.789
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.