STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOD1Myogenic factor. (297 aa)    
Predicted Functional Partners:
PAX7
Paired box 7.
   
 
 0.965
PAX3
Paired box 3.
   
 
 0.907
MEF2D
Myocyte enhancer factor 2D.
    
 0.869
MSTN
Myostatin.
   
  
 0.818
EP300
E1A binding protein p300.
    
 
 0.797
MEF2C
Myocyte enhancer factor 2C.
    
 0.770
SMAD3
Mothers against decapentaplegic homolog.
   
 
 0.769
TCF3
Transcription factor 3.
    
 0.764
MEF2A
Myocyte enhancer factor 2A.
    
 0.761
ENSAPLP00000019874
MADS-box domain-containing protein.
    
 0.740
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.