STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JADE3Jade family PHD finger 3. (823 aa)    
Predicted Functional Partners:
MEAF6
MYST/Esa1 associated factor 6.
    
 0.959
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.835
U3J214_ANAPP
Inhibitor of growth protein.
    
 0.820
ING4
Inhibitor of growth protein.
    
 0.820
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.622
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.622
U3ID53_ANAPP
SGL domain-containing protein.
 
      0.576
U3I7D3_ANAPP
Uncharacterized protein.
    
 
 0.564
PACC1
Proton activated chloride channel 1.
      
 0.547
RGN
Regucalcin.
 
      0.544
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.