STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPPIntracisternal A particle-promoted polypeptide. (589 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.761
CYB561A3
Cytochrome b561 family member A3.
      
 0.749
POLR3H
RNA polymerase III subunit H.
      
 0.678
USP33
Ubiquitin carboxyl-terminal hydrolase.
     
 0.636
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
      
 0.624
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
 
 0.615
PHYH
Phytanoyl-CoA 2-hydroxylase.
      
 0.611
UQCRB
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
      
 0.611
RPL14
Ribosomal protein L14.
    
 
 0.587
NANP
N-acetylneuraminic acid phosphatase.
   
 
 0.561
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.