STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN6Contactin 6. (965 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.927
VPS53
VPS53 subunit of GARP complex.
      
 0.752
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.742
RPH3AL
Uncharacterized protein.
   
  
 0.734
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.726
SYT10
Synaptotagmin 10.
   
  
 0.712
ENSAPLP00000029866
Bravo_FIGEY domain-containing protein.
 
 
 0.657
CNTNAP2
Contactin associated protein like 2.
   
 0.640
NRCAM
Neuronal cell adhesion molecule.
    
0.631
CHL1
Cell adhesion molecule L1 like.
    
0.631
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.