STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IDH4_ANAPPTLDc domain-containing protein. (403 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family.
    
 0.767
CDC16
Cell division cycle 16.
      
 0.634
TUBGCP6
Tubulin gamma complex associated protein 6.
      
 0.598
AGAP1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
      
 0.551
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.528
HMX2
H6 family homeobox 2.
      
 0.521
IFT27
Intraflagellar transport 27.
    
 0.495
GPR6
G protein-coupled receptor 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.482
ST8SIA5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.471
SLC25A22
Solute carrier family 25 member 22; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.457
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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