Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNHCyclin H; Belongs to the cyclin family. (323 aa)    
Predicted Functional Partners:
MNAT1
MNAT1 component of CDK activating kinase.
   
 0.999
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
   
 0.999
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.992
GTF2H1
General transcription factor IIH subunit 1.
    
 0.991
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.984
GTF2H2
General transcription factor IIH subunit.
   
 0.973
GTF2H3
General transcription factor IIH subunit 3.
   
 0.969
GTF2H5
General transcription factor IIH subunit 5.
    
 0.956
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
    
 0.947
ENSAPLP00000019176
annotation not available
    
 0.945
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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