STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTNSCystinosin, lysosomal cystine transporter. (382 aa)    
Predicted Functional Partners:
SHPK
FGGY_N domain-containing protein.
      
 0.861
SLC66A1
Solute carrier family 66 member 1.
    
 
 0.859
MFSD12
Uncharacterized protein.
      
 0.704
SUMF1
Sulfatase modifying factor 1.
      
 0.670
NIPAL4
NIPA like domain containing 4.
      
 0.589
SLC17A5
Solute carrier family 17 member 5.
      
 0.573
PI4K2B
Phosphatidylinositol 4-kinase type 2 beta.
   
  
 0.551
ENSAPLP00000018544
Uncharacterized protein.
   
  
 0.551
LAMP1
Lysosomal associated membrane protein 1.
      
 0.550
GNG13
G protein subunit gamma 13.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.