STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTN4Reticulon. (1011 aa)    
Predicted Functional Partners:
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.837
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.822
ATL1
Atlastin GTPase 1.
    
 
 0.740
ATL2
Atlastin GTPase 2.
    
 
 0.733
SEC62
SEC62 homolog, preprotein translocation factor.
   
 
 0.690
MANF
Mesencephalic astrocyte derived neurotrophic factor.
   
 
 0.683
REEP5
Receptor expression-enhancing protein.
    
 
 0.670
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.634
RTN4R
Reticulon 4 receptor.
    
 0.622
REEP6
Receptor expression-enhancing protein.
    
 
 0.590
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.