STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIH1D2PIH1_CS domain-containing protein. (180 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.975
RPAP3
RNA polymerase II associated protein 3.
   
 0.963
SPAG1
Sperm associated antigen 1.
    
 
 0.890
NOP58
NOP58 ribonucleoprotein.
    
 
 0.867
PIH1D3
PIH1 domain containing 3.
    
 
 0.848
DNAAF4
Dynein axonemal assembly factor 4.
   
 
 0.830
PDRG1
P53 and DNA damage regulated 1.
    
 
 0.785
POLR2E
RNA polymerase II subunit E.
   
 
 0.775
PFDN2
Prefoldin subunit 2.
   
 
 0.766
TELO2
Telomere maintenance 2.
    
 
 0.762
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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