Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HID1HID1 domain containing. (804 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
   
 
 0.778
NUP214
Nucleoporin 214.
    
 
 0.725
NUP54
Nucleoporin 54.
   
 
 0.724
NUP133
Nucleoporin 133.
   
 
 0.713
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
    
 
 0.693
USP40
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 
 0.693
ENSAPLP00000020998
NTF2 domain-containing protein.
    
 
 0.690
NUP155
Nucleoporin 155.
    
 
 0.682
RAE1
Ribonucleic acid export 1.
    
 
 0.665
TMEM128
Transmembrane protein 128.
      
 0.623
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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